CDS

Accession Number TCMCG057C20738
gbkey CDS
Protein Id XP_018484267.1
Location join(40282224..40282460,40282656..40282708,40283200..40283246,40283349..40283420,40292626..40292660,40293098..40293491,40294033..40294640,40294710..40294775)
Gene LOC108855061
GeneID 108855061
Organism Raphanus sativus

Protein

Length 503aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018628765.1
Definition PREDICTED: actin-100-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Z
Description ATP binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05692        [VIEW IN KEGG]
ko:K10355        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04015        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko04210        [VIEW IN KEGG]
ko04390        [VIEW IN KEGG]
ko04391        [VIEW IN KEGG]
ko04510        [VIEW IN KEGG]
ko04520        [VIEW IN KEGG]
ko04530        [VIEW IN KEGG]
ko04611        [VIEW IN KEGG]
ko04670        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04745        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko04919        [VIEW IN KEGG]
ko04921        [VIEW IN KEGG]
ko05100        [VIEW IN KEGG]
ko05110        [VIEW IN KEGG]
ko05130        [VIEW IN KEGG]
ko05131        [VIEW IN KEGG]
ko05132        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
ko05205        [VIEW IN KEGG]
ko05225        [VIEW IN KEGG]
ko05410        [VIEW IN KEGG]
ko05412        [VIEW IN KEGG]
ko05414        [VIEW IN KEGG]
ko05416        [VIEW IN KEGG]
ko05418        [VIEW IN KEGG]
map04015        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map04210        [VIEW IN KEGG]
map04390        [VIEW IN KEGG]
map04391        [VIEW IN KEGG]
map04510        [VIEW IN KEGG]
map04520        [VIEW IN KEGG]
map04530        [VIEW IN KEGG]
map04611        [VIEW IN KEGG]
map04670        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04745        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
map04921        [VIEW IN KEGG]
map05100        [VIEW IN KEGG]
map05110        [VIEW IN KEGG]
map05130        [VIEW IN KEGG]
map05131        [VIEW IN KEGG]
map05132        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
map05205        [VIEW IN KEGG]
map05225        [VIEW IN KEGG]
map05410        [VIEW IN KEGG]
map05412        [VIEW IN KEGG]
map05414        [VIEW IN KEGG]
map05416        [VIEW IN KEGG]
map05418        [VIEW IN KEGG]
GOs GO:0000287        [VIEW IN EMBL-EBI]
GO:0001725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0003785        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005509        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005523        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005858        [VIEW IN EMBL-EBI]
GO:0005865        [VIEW IN EMBL-EBI]
GO:0005875        [VIEW IN EMBL-EBI]
GO:0005884        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0005930        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007517        [VIEW IN EMBL-EBI]
GO:0007519        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008154        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009887        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010927        [VIEW IN EMBL-EBI]
GO:0014706        [VIEW IN EMBL-EBI]
GO:0014866        [VIEW IN EMBL-EBI]
GO:0014902        [VIEW IN EMBL-EBI]
GO:0014904        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0017022        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030016        [VIEW IN EMBL-EBI]
GO:0030017        [VIEW IN EMBL-EBI]
GO:0030027        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030041        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030175        [VIEW IN EMBL-EBI]
GO:0030239        [VIEW IN EMBL-EBI]
GO:0030240        [VIEW IN EMBL-EBI]
GO:0030286        [VIEW IN EMBL-EBI]
GO:0031013        [VIEW IN EMBL-EBI]
GO:0031032        [VIEW IN EMBL-EBI]
GO:0031252        [VIEW IN EMBL-EBI]
GO:0031432        [VIEW IN EMBL-EBI]
GO:0031941        [VIEW IN EMBL-EBI]
GO:0032036        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032781        [VIEW IN EMBL-EBI]
GO:0032838        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0036156        [VIEW IN EMBL-EBI]
GO:0036379        [VIEW IN EMBL-EBI]
GO:0042641        [VIEW IN EMBL-EBI]
GO:0042692        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043292        [VIEW IN EMBL-EBI]
GO:0043462        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044297        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044447        [VIEW IN EMBL-EBI]
GO:0044449        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0048306        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048741        [VIEW IN EMBL-EBI]
GO:0048747        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0051017        [VIEW IN EMBL-EBI]
GO:0051146        [VIEW IN EMBL-EBI]
GO:0051258        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0055001        [VIEW IN EMBL-EBI]
GO:0055002        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060485        [VIEW IN EMBL-EBI]
GO:0060537        [VIEW IN EMBL-EBI]
GO:0060538        [VIEW IN EMBL-EBI]
GO:0061061        [VIEW IN EMBL-EBI]
GO:0061572        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072132        [VIEW IN EMBL-EBI]
GO:0090130        [VIEW IN EMBL-EBI]
GO:0090131        [VIEW IN EMBL-EBI]
GO:0097014        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0097517        [VIEW IN EMBL-EBI]
GO:0098723        [VIEW IN EMBL-EBI]
GO:0098858        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1904621        [VIEW IN EMBL-EBI]
GO:1904623        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGATCCGGAAGCGACAAGTGCCTCTTCCTCTTTCGTCTCTCTTACCTGTTCCTCTCTCAGATCTCTACTCTAACCGTTCCCCGACGGCCGCCGCTCGTTACTTTTACGGCCAAGACATAGAGGGAGGAGGAGGAGGTTCTCCTTCTCCTCTTCTTCAGCTTCCGACGCCGCCGCCTGATAGGCTGATTCAGAGAGATGTGACGAGGAAGGAGGAGGACGAGGAGAAAGCTTTGGATGATGATAATGATGTAGACGTGAAGAAGAGATGTACAGTTGCATCGGGCAGCAAGAAGTACGTTAATCCCCAAGGAGAATCCGACTCTTCAACACGAGTTACGTTGAGGAAGAGAAGAGGCTATACAAGCTTCGAGGAGCAAGACGAGGATGAGGAGGAAGAAGAAGAAGCTATCGTGTGTGACAACGGAACTGGAATGGTCAAGGCGGGACTAGCTGGAGACGATACACCAAGAGCTGTGGTTCCATGCATCGTTGGCCGTCCACGAGACATGGGAGAGATGGTTGGAATGTCTCAGAAGCAGTCCTATGTGGGAGACCAAGCTCAAGGCAAGAGAGGTATTCTAACACTTGAATACCCAATCGAGCATGGTATCATTAACAATTGGGATGCCATGGAGATGATTTGGCACCATACTTTCCACAATGAGCTACGTGTGGCGCCTGAAGAACACCCTGTGCTTCTCACGGAAGCTCCTCTAAACCCAAAGGCCAATCGAGAGAAGATGACTGAAATCATGTTTGAGATCTTTGATGTTCCTAAATTATACGTTGCCATACAAGCCGTTCTCTCCCTCCATGCCACTGGTCGTACTACAGGGATTGTGGTGGATTCAGGAGATGGTGTAAGCCAAATAGTTCCCATTCACGAAGGTTTCGCACTCTCACAGGCGATCTTGCGTCTAGACCTAGCAGGCCGTGACATAACAGACTACCTCGCCAAGATCATGAACGAACGTGGCTACGCGACAACCGCCGAGCGTGAGATCTTAAGAGACATCAAAGAGAAACTAGGTTACGTAGCTCTCGACCACGACCAAGAAATGGAGAAAGCCACTGCGAGCTCAGCCATCGAGAGAACCTACGAGCTTCCAGATGGTCAAGTGATCACGATAGGAGCCGAGAGATTCAGGTGTTCTGAGGTTCTTTTTAAGCCCTCCTTGGTCGACATGGAAGCTTGTGGTATCCATGAGATGACTTACAATTCAATCATGAAGTGTGATGTTGACGTAAGGAAGGATTTGTATGGAGACATTGTATTGAGCGGTGGCACAACGACGTTCCCTGGGTTTGTTGACAGGATGAGCAAAGAGATCGTTGCGCTTGCACCTGCTAGCATGAAGATTAAACTAGTGGTTTCTCCTGCGAGGAAGAACAATGTTTGGATTGGAGGCTCCATTTTGGCTTCTTTAGACAGTTTACAACAGATGTGGGTGACTAAGGCTGAGTATGACGAAAATGGACCTGGGATTATTCACAGAAAATGCTTCTAA
Protein:  
MRIRKRQVPLPLSSLLPVPLSDLYSNRSPTAAARYFYGQDIEGGGGGSPSPLLQLPTPPPDRLIQRDVTRKEEDEEKALDDDNDVDVKKRCTVASGSKKYVNPQGESDSSTRVTLRKRRGYTSFEEQDEDEEEEEEAIVCDNGTGMVKAGLAGDDTPRAVVPCIVGRPRDMGEMVGMSQKQSYVGDQAQGKRGILTLEYPIEHGIINNWDAMEMIWHHTFHNELRVAPEEHPVLLTEAPLNPKANREKMTEIMFEIFDVPKLYVAIQAVLSLHATGRTTGIVVDSGDGVSQIVPIHEGFALSQAILRLDLAGRDITDYLAKIMNERGYATTAEREILRDIKEKLGYVALDHDQEMEKATASSAIERTYELPDGQVITIGAERFRCSEVLFKPSLVDMEACGIHEMTYNSIMKCDVDVRKDLYGDIVLSGGTTTFPGFVDRMSKEIVALAPASMKIKLVVSPARKNNVWIGGSILASLDSLQQMWVTKAEYDENGPGIIHRKCF